SHARP: Harmonizing Cross-workflow Provenance
نویسندگان
چکیده
PROV has been adopted by a number of workflow systems for encoding the traces of workflow executions. Exploiting these provenance traces is hampered by two main impediments. Firstly, workflow systems extend PROV differently to cater for system-specific constructs. The difference between the adopted PROV extensions yields heterogeneity in the generated provenance traces. This heterogeneity diminishes the value of such traces, e.g. when combining and querying provenance traces of different workflow systems. Secondly, the provenance recorded by workflow systems tends to be large, and as such difficult to browse and understand by a human user. In this paper, we propose SHARP, a Linked Data approach for harmonizing cross-workflow provenance. The harmonization is performed by chasing tuple-generating and equalitygenerating dependencies defined for workflow provenance. This results in a provenance graph that can be summarized using domain-specific vocabularies. We experimentally evaluate the effectiveness of SHARP using a real-world omic experiment involving workflow traces generated by the Taverna and Galaxy systems.
منابع مشابه
SHARP: Harmonizing Galaxy and Taverna Workflow Provenance
SHARP is a Linked Data approach for harmonizing cross-workflow provenance. In this demo, we demonstrate SHARP through a real-world omic experiment involving workflow traces generated by Taverna and Galaxy systems. SHARP starts by interlinking provenance traces generated by Galaxy and Taverna workflows and then harmonize the interlinked graphs thanks to OWL and PROV inference rules. The resultin...
متن کاملThe Aspect-Oriented Architecture of the CAPS Framework for Capturing, Analyzing and Archiving Provenance Data
With aspect-oriented programming techniques, modularity may be achieved via separating cross-cutting concerns. Data provenance can be considered as a crosscutting concern: code for collecting provenance data is usually scattered across various places in a software system. Aspect-oriented programming allows to seamlessly integrate cross-cutting concerns into existing software applications withou...
متن کاملA Model to Capture Interaction between Data Provenance and Workflow Provenance
Provenance means origin. There are two types of Provenance namely Data Provenance and Workflow Provenance. Data Provenance refers to the process of recording and tracking the source or origin of data while workflow provenance means history of workflows and their data that were used while performing an operation to get required result. The results which are obtained while performing operations a...
متن کاملProvenance Collection Support in the Kepler Scientific Workflow System
In many data-driven applications, analysis needs to be performed on scientific information obtained from several sources and generated by computations on distributed resources. Systematic analysis of this scientific information unleashes a growing need for automated data-driven applications that also can keep track of the provenance of the data and processes with little user interaction and ove...
متن کاملAbstract Provenance Graphs: Anticipating and Exploiting Schema-Level Data Provenance
Provenance Graphs: Anticipating and Exploiting Schema-Level Data Provenance Daniel Zinn Bertram Ludäscher {dzinn,ludaesch}@ucdavis.edu Abstract. Provenance graphs capture flow and dependency information recorded during scientific workflow runs, which can be used subsequently to interpret, validate, and debug workflow results. In this paper, we propose a new concept, called abstract provenance g...
متن کامل